Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | SAMN05444679_13131 | Not Available | Negative | 6267649 - 6268779 | 40560.8 |
| transcriptional regulator, lysr family | SAMN05444679_13132 | Not Available | Negative | 6268776 - 6269702 | 33804.7 |
| tartrate dehydrogenase/decarboxylase / d-malate dehydrogenase | SAMN05444679_13133 | Not Available | Positive | 6269810 - 6270904 | 39460.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_13134 | Not Available | Positive | 6270940 - 6271944 | 35081.6 |
| hypothetical protein | SAMN05444679_13135 | Not Available | Negative | 6271960 - 6272424 | 16721.3 |
| peroxiredoxin | SAMN05444679_13136 | Not Available | Negative | 6272436 - 6273128 | 24057.6 |
| thiol:disulfide interchange protein dsbd | SAMN05444679_13137 | Not Available | Negative | 6273222 - 6275405 | 75502.5 |
| misacylated trna(ala) deacylase | SAMN05444679_13138 | Not Available | Negative | 6275452 - 6276195 | 26741.9 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05444679_13139 | Not Available | Positive | 6276330 - 6277667 | 47072.3 |
| zinc-binding alcohol dehydrogenase family protein | SAMN05444679_13140 | Not Available | Negative | 6277674 - 6278684 | 35365.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
