Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_13121 | Not Available | Positive | 6256267 - 6257247 | 34472.1 |
| mfs transporter, mhs family, alpha-ketoglutarate permease | SAMN05444679_13122 | Not Available | Negative | 6257264 - 6258595 | 47925.7 |
| phospholipase a1 | SAMN05444679_13123 | Not Available | Negative | 6258685 - 6259845 | 43122.7 |
| hypothetical protein | SAMN05444679_13124 | Not Available | Negative | 6259842 - 6260273 | 14944.5 |
| atp-dependent dna helicase rep | SAMN05444679_13125 | Not Available | Negative | 6260270 - 6262369 | 77947.8 |
| hypothetical protein | SAMN05444679_13126 | Not Available | Positive | 6262479 - 6262607 | 4758.91 |
| cardiolipin synthase | SAMN05444679_13127 | Not Available | Positive | 6262638 - 6263762 | 41456.8 |
| hypothetical protein | SAMN05444679_13128 | Not Available | Positive | 6263708 - 6264808 | 37407.8 |
| hypothetical protein | SAMN05444679_13129 | Not Available | Positive | 6264963 - 6265172 | 7714.56 |
| replication restart dna helicase pria | SAMN05444679_13130 | Not Available | Negative | 6265180 - 6267279 | 75500.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
