Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema protein | SAMN05444679_13111 | Not Available | Positive | 6245796 - 6246398 | 20972.3 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN05444679_13112 | Not Available | Positive | 6246359 - 6247786 | 51446.9 |
| protein of unknown function | SAMN05444679_13113 | Not Available | Positive | 6247845 - 6248390 | 20531.5 |
| signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation | SAMN05444679_13114 | Not Available | Positive | 6248450 - 6250717 | 81214.9 |
| response regulator receiver domain-containing protein | SAMN05444679_13115 | Not Available | Positive | 6250789 - 6251487 | 25235.3 |
| Trna-phe | Not Available | Not Available | Positive | 6251568 - 6251643 | Not Available |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05444679_13117 | Not Available | Negative | 6252149 - 6252787 | 22660.1 |
| transcriptional regulator, gntr family | SAMN05444679_13118 | Not Available | Negative | 6252970 - 6253662 | 25289.6 |
| dihydroxy-acid dehydratase | SAMN05444679_13119 | Not Available | Positive | 6253749 - 6255476 | 62619.7 |
| regulator of rnase e activity rraa | SAMN05444679_13120 | Not Available | Positive | 6255520 - 6256230 | 25574.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
