Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu c-terminal domain-containing protein | SAMN05444679_1311 | Not Available | Positive | 6233297 - 6233397 | 3369.17 |
| Trna-trp | Not Available | Not Available | Positive | 6233408 - 6233483 | Not Available |
| protein translocase subunit sece/sec61 gamma | SAMN05444679_1313 | Not Available | Positive | 6233628 - 6234011 | 14017.2 |
| transcription antitermination protein nusg | SAMN05444679_1314 | Not Available | Positive | 6234011 - 6234607 | 22516.9 |
| lsu ribosomal protein l11p | SAMN05444679_1315 | Not Available | Positive | 6234724 - 6235155 | 15089.8 |
| lsu ribosomal protein l1p | SAMN05444679_1316 | Not Available | Positive | 6235155 - 6235856 | 24028.5 |
| lsu ribosomal protein l10p | SAMN05444679_1317 | Not Available | Positive | 6236101 - 6236634 | 18404.3 |
| lsu ribosomal protein l12p | SAMN05444679_1318 | Not Available | Positive | 6236673 - 6237050 | 12738.4 |
| dna-directed rna polymerase subunit beta | SAMN05444679_1319 | Not Available | Positive | 6237344 - 6241468 | 152698.0 |
| dna-directed rna polymerase subunit beta' | SAMN05444679_13110 | Not Available | Positive | 6241488 - 6245723 | 154936.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
