Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein n-acetyltransferase, rimj/riml family | SAMN05444679_13062 | Not Available | Positive | 6222739 - 6223344 | 23115.6 |
| siderophore synthetase component | SAMN05444679_13063 | Not Available | Positive | 6223341 - 6225224 | 70419.6 |
| siderophore ferric iron reductase, aha_1954 family | SAMN05444679_13064 | Not Available | Positive | 6225233 - 6226021 | 27805.7 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN05444679_13065 | Not Available | Positive | 6226087 - 6227280 | 44990.0 |
| carotenoid cleavage dioxygenase | SAMN05444679_13066 | Not Available | Negative | 6227235 - 6228728 | 54151.8 |
| uncharacterized conserved protein, duf2141 family | SAMN05444679_13067 | Not Available | Negative | 6228736 - 6229173 | 14900.8 |
| predicted purr-regulated permease perm | SAMN05444679_13068 | Not Available | Negative | 6229297 - 6230364 | 38613.3 |
| dna-binding transcriptional regulator, gntr family | SAMN05444679_13069 | Not Available | Negative | 6230402 - 6231100 | 25215.3 |
| aerobic c4-dicarboxylate transport protein | SAMN05444679_13070 | Not Available | Negative | 6231123 - 6232457 | 46469.4 |
| hypothetical protein | SAMN05444679_13071 | Not Available | Negative | 6232980 - 6233296 | 12027.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
