Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxypyruvate isomerase | SAMN05444679_13052 | Not Available | Negative | 6210547 - 6211326 | 28341.1 |
| tartronate-semialdehyde synthase | SAMN05444679_13053 | Not Available | Negative | 6211347 - 6213140 | 64903.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_13054 | Not Available | Positive | 6213254 - 6214156 | 32903.9 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05444679_13055 | Not Available | Negative | 6214208 - 6214822 | 21875.5 |
| transcriptional regulator, arac family with amidase-like domain | SAMN05444679_13056 | Not Available | Positive | 6214902 - 6216017 | 41381.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444679_13057 | Not Available | Positive | 6216104 - 6216613 | 18889.6 |
| fecr family protein | SAMN05444679_13058 | Not Available | Positive | 6216662 - 6217702 | 37444.4 |
| iron complex outermembrane recepter protein | SAMN05444679_13059 | Not Available | Positive | 6217802 - 6220180 | 86317.6 |
| lysine n6-hydroxylase | SAMN05444679_13060 | Not Available | Positive | 6220204 - 6221517 | 50998.4 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_13061 | Not Available | Positive | 6221529 - 6222749 | 44868.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
