Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna(arg) a34 adenosine deaminase tada | SAMN05444679_13032 | Not Available | Negative | 6192946 - 6193458 | 18463.8 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN05444679_13033 | Not Available | Positive | 6193740 - 6194816 | 41009.7 |
| enolase c-terminal domain-like | SAMN05444679_13034 | Not Available | Negative | 6194854 - 6195078 | 7790.42 |
| transcriptional regulator, arac family | SAMN05444679_13035 | Not Available | Positive | 6195349 - 6196221 | 30818.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_13036 | Not Available | Positive | 6196265 - 6197161 | 32241.1 |
| putative redox protein | SAMN05444679_13037 | Not Available | Positive | 6197283 - 6197681 | 14430.2 |
| conserved hypothetical protein | SAMN05444679_13038 | Not Available | Negative | 6197682 - 6197996 | 11463.8 |
| isopenicillin n synthase | SAMN05444679_13039 | Not Available | Negative | 6198069 - 6199040 | 35430.1 |
| nitt/taut family transport system substrate-binding protein | SAMN05444679_13040 | Not Available | Negative | 6199060 - 6200088 | 36367.5 |
| hypothetical protein | SAMN05444679_13041 | Not Available | Negative | 6200229 - 6200693 | 15540.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
