Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine/d-amino acid oxidase | SAMN05444679_13022 | Not Available | Negative | 6182019 - 6184949 | 103183.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05444679_13023 | Not Available | Positive | 6185050 - 6185946 | 32687.9 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_13024 | Not Available | Positive | 6186006 - 6186842 | 29961.6 |
| amino acid abc transporter membrane protein, paat family | SAMN05444679_13025 | Not Available | Positive | 6186879 - 6187598 | 26290.6 |
| dihydropyrimidinase | SAMN05444679_13026 | Not Available | Positive | 6187612 - 6189066 | 52936.7 |
| dna-binding transcriptional regulator, gntr family | SAMN05444679_13027 | Not Available | Positive | 6189138 - 6189824 | 25960.0 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_13028 | Not Available | Negative | 6189802 - 6191385 | 55802.2 |
| urease accessory protein | SAMN05444679_13029 | Not Available | Negative | 6191328 - 6192158 | 29986.3 |
| predicted kinase | SAMN05444679_13030 | Not Available | Negative | 6192163 - 6192684 | 18915.9 |
| slyx protein | SAMN05444679_13031 | Not Available | Negative | 6192701 - 6192958 | 9643.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
