Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triacylglycerol lipase | SAMN05444679_13012 | Not Available | Positive | 6172337 - 6173188 | 30518.1 |
| marr family protein | SAMN05444679_13013 | Not Available | Positive | 6173240 - 6173524 | 10108.3 |
| hypothetical protein | SAMN05444679_13014 | Not Available | Positive | 6173550 - 6173867 | 11286.3 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_13015 | Not Available | Positive | 6174016 - 6175287 | 46003.3 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444679_13016 | Not Available | Positive | 6175397 - 6176989 | 56114.8 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444679_13017 | Not Available | Positive | 6176986 - 6178200 | 43899.7 |
| urea transport system atp-binding protein | SAMN05444679_13018 | Not Available | Positive | 6178197 - 6179072 | 31873.5 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444679_13019 | Not Available | Positive | 6179075 - 6179767 | 25300.0 |
| membrane protein deda, snare-associated domain | SAMN05444679_13020 | Not Available | Positive | 6179813 - 6180757 | 33476.7 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN05444679_13021 | Not Available | Negative | 6180761 - 6182008 | 44276.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
