Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin yhav | SAMN05444679_1302 | Not Available | Positive | 6163124 - 6163630 | 19651.5 |
| two component transcriptional regulator, luxr family | SAMN05444679_1303 | Not Available | Negative | 6163925 - 6164575 | 23480.4 |
| tryptophanyl-trna synthetase | SAMN05444679_1304 | Not Available | Negative | 6164591 - 6165916 | 48462.8 |
| zn-dependent protease (includes spoivfb) | SAMN05444679_1305 | Not Available | Negative | 6165927 - 6166598 | 24326.5 |
| trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc family | SAMN05444679_1306 | Not Available | Negative | 6166635 - 6167282 | 23718.9 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444679_1307 | Not Available | Negative | 6167288 - 6168232 | 33732.1 |
| hypothetical protein | SAMN05444679_1308 | Not Available | Negative | 6168229 - 6169083 | 31198.7 |
| zinc transporter | SAMN05444679_1309 | Not Available | Negative | 6169110 - 6170138 | 37695.3 |
| polyphosphate kinase 2, pa0141 family | SAMN05444679_13010 | Not Available | Positive | 6170304 - 6171221 | 36248.2 |
| esterase, phb depolymerase family | SAMN05444679_13011 | Not Available | Positive | 6171286 - 6172332 | 36866.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
