Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical integral membrane protein | SAMN05444679_12971 | Not Available | Negative | 6151063 - 6151692 | 21366.9 |
| acetylornithine deacetylase | SAMN05444679_12972 | Not Available | Negative | 6152082 - 6153269 | 41280.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12973 | Not Available | Negative | 6153269 - 6154234 | 33708.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12974 | Not Available | Negative | 6154238 - 6155218 | 34254.1 |
| acetolactate synthase-1/2/3 large subunit | SAMN05444679_12975 | Not Available | Negative | 6155258 - 6156868 | 56711.5 |
| acyl-coa dehydrogenase | SAMN05444679_12976 | Not Available | Negative | 6156877 - 6158088 | 43650.6 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444679_12977 | Not Available | Negative | 6158076 - 6159305 | 43672.3 |
| aspartate aminotransferase | SAMN05444679_12978 | Not Available | Negative | 6159302 - 6160453 | 41003.3 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_12979 | Not Available | Positive | 6160602 - 6161507 | 32229.2 |
| antitoxin prlf | SAMN05444679_1301 | Not Available | Positive | 6162801 - 6163127 | 11784.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
