Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcomoda/2-hydroxy-3-carboxy-muconic semialdehyde decarboxylase | SAMN05444679_12961 | Not Available | Negative | 6141909 - 6142607 | 24801.8 |
| 2,3-dihydroxy-p-cumate/2,3-dihydroxybenzoate 3,4-dioxygenase | SAMN05444679_12962 | Not Available | Negative | 6142619 - 6143488 | 32750.6 |
| transcriptional regulator, lysr family | SAMN05444679_12963 | Not Available | Positive | 6143570 - 6144538 | 35768.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_12964 | Not Available | Negative | 6144556 - 6145467 | 34136.3 |
| 3-oxoacyl-[acyl-carrier protein] reductase/(s)-1-phenylethanol dehydrogenase | SAMN05444679_12965 | Not Available | Positive | 6145570 - 6146301 | 25429.4 |
| n-ethylmaleimide reductase | SAMN05444679_12966 | Not Available | Positive | 6146279 - 6147421 | 40751.4 |
| hypothetical protein | SAMN05444679_12967 | Not Available | Positive | 6147433 - 6148257 | 29034.7 |
| nicotinamidase-related amidase | SAMN05444679_12968 | Not Available | Positive | 6148311 - 6148916 | 21503.2 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05444679_12969 | Not Available | Positive | 6149212 - 6150324 | 40075.1 |
| hypothetical protein | SAMN05444679_12970 | Not Available | Positive | 6150768 - 6151019 | 9428.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
