Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_12951 | Not Available | Negative | 6130763 - 6131263 | 18096.3 |
| molecular chaperone dnaj | SAMN05444679_12952 | Not Available | Negative | 6131764 - 6132843 | 38811.0 |
| cytochrome p450 | SAMN05444679_12953 | Not Available | Negative | 6133547 - 6134998 | 53666.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12954 | Not Available | Negative | 6135580 - 6136575 | 34727.1 |
| 4-hydroxy-2-oxovalerate aldolase | SAMN05444679_12955 | Not Available | Negative | 6136643 - 6137710 | 38479.0 |
| acetaldehyde dehydrogenase | SAMN05444679_12956 | Not Available | Negative | 6137722 - 6138675 | 33580.7 |
| 4-oxalocrotonate tautomerase | SAMN05444679_12957 | Not Available | Negative | 6138668 - 6138874 | 7037.58 |
| 2-oxo-3-hexenedioate decarboxylase | SAMN05444679_12958 | Not Available | Negative | 6138882 - 6139655 | 27420.8 |
| 2-keto-4-pentenoate hydratase | SAMN05444679_12959 | Not Available | Negative | 6139652 - 6140446 | 28014.1 |
| 2-hydroxymuconate semialdehyde dehydrogenase | SAMN05444679_12960 | Not Available | Negative | 6140443 - 6141912 | 52019.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
