Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maleate isomerase | SAMN05444679_12941 | Not Available | Positive | 6119107 - 6119832 | 25799.1 |
| transcriptional regulator, gntr family | SAMN05444679_12942 | Not Available | Positive | 6119832 - 6120629 | 30275.5 |
| dde superfamily endonuclease | SAMN05444679_12943 | Not Available | Negative | 6120675 - 6121187 | 19670.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12944 | Not Available | Negative | 6121683 - 6122675 | 35317.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_12945 | Not Available | Negative | 6122717 - 6123658 | 33607.0 |
| dna-binding transcriptional regulator, marr family | SAMN05444679_12946 | Not Available | Positive | 6123822 - 6124301 | 18288.2 |
| protein of unknown function | SAMN05444679_12947 | Not Available | Negative | 6124761 - 6124964 | 7878.92 |
| integral membrane protein terc family protein | SAMN05444679_12948 | Not Available | Positive | 6125075 - 6125494 | 15260.1 |
| monoamine oxidase | SAMN05444679_12949 | Not Available | Positive | 6125671 - 6127251 | 59936.5 |
| predicted atpase | SAMN05444679_12950 | Not Available | Positive | 6127309 - 6130758 | 126181.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
