Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444679_12921 | Not Available | Positive | 6098630 - 6099490 | 30383.6 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444679_12922 | Not Available | Positive | 6099487 - 6100461 | 34865.8 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444679_12923 | Not Available | Positive | 6100458 - 6101228 | 27572.6 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444679_12924 | Not Available | Positive | 6101225 - 6101935 | 25667.3 |
| n-carbamoyl-l-amino-acid hydrolase | SAMN05444679_12925 | Not Available | Positive | 6101970 - 6103250 | 45138.9 |
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN05444679_12926 | Not Available | Positive | 6103247 - 6104380 | 40042.6 |
| microcystin degradation protein mlrc, contains duf1485 domain | SAMN05444679_12927 | Not Available | Positive | 6104377 - 6105888 | 53269.2 |
| hypothetical protein | SAMN05444679_12928 | Not Available | Negative | 6105923 - 6106021 | 3557.35 |
| alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase | SAMN05444679_12929 | Not Available | Negative | 6106384 - 6107607 | 43878.2 |
| 2-keto-4-pentenoate hydratase | SAMN05444679_12930 | Not Available | Negative | 6107639 - 6108415 | 27244.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
