Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acyl-coa dehydrogenase | SAMN05444679_12868 | Not Available | Negative | 6082304 - 6084025 | 62629.3 |
| transcriptional regulator, tetr family | SAMN05444679_12869 | Not Available | Negative | 6084022 - 6084708 | 24474.2 |
| hypothetical protein | SAMN05444679_1291 | Not Available | Negative | 6085090 - 6085164 | 2692.33 |
| conserved hypothetical protein | SAMN05444679_1292 | Not Available | Negative | 6085382 - 6085708 | 12120.4 |
| hypothetical protein | SAMN05444679_1293 | Not Available | Negative | 6086232 - 6086513 | 10612.4 |
| hypothetical protein | SAMN05444679_1294 | Not Available | Positive | 6086871 - 6086963 | 3620.53 |
| hypothetical protein | SAMN05444679_1295 | Not Available | Positive | 6087629 - 6087769 | 4804.71 |
| hypothetical protein | SAMN05444679_1296 | Not Available | Positive | 6088276 - 6088455 | 6538.72 |
| hypothetical protein | SAMN05444679_1297 | Not Available | Positive | 6088478 - 6088735 | 9780.72 |
| metallo-beta-lactamase class b | SAMN05444679_1298 | Not Available | Negative | 6088743 - 6089774 | 36154.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
