Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allantoin racemase | SAMN05444679_102103 | Not Available | Negative | 578584 - 579348 | 26532.2 |
| nucleobase:cation symporter-1, ncs1 family | SAMN05444679_102104 | Not Available | Negative | 579355 - 580884 | 55677.5 |
| acylphosphatase | SAMN05444679_102105 | Not Available | Positive | 580995 - 581303 | 11511.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_102106 | Not Available | Positive | 581397 - 582395 | 34458.3 |
| dihydroxy-acid dehydratase | SAMN05444679_102107 | Not Available | Positive | 582409 - 584139 | 61135.0 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_102108 | Not Available | Negative | 584136 - 585014 | 31420.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05444679_102109 | Not Available | Positive | 585121 - 586059 | 33171.9 |
| predicted oxidoreductase | SAMN05444679_102110 | Not Available | Positive | 586123 - 587133 | 36744.0 |
| putative abc transport system substrate-binding protein | SAMN05444679_102111 | Not Available | Negative | 587158 - 588141 | 35034.6 |
| cache domain-containing protein | SAMN05444679_102112 | Not Available | Positive | 588271 - 590769 | 90424.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
