Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor switch protein flig | SAMN05444679_10148 | Not Available | Negative | 43439 - 44440 | 36774.3 |
| flagellar m-ring protein flif | SAMN05444679_10149 | Not Available | Negative | 44437 - 46134 | 59557.5 |
| flagellar hook-basal body complex protein flie | SAMN05444679_10150 | Not Available | Positive | 46419 - 46736 | 11163.4 |
| flagellin | SAMN05444679_10151 | Not Available | Positive | 46909 - 48198 | 43675.8 |
| flagellar protein flag | SAMN05444679_10152 | Not Available | Positive | 48320 - 48679 | 12362.6 |
| flagellar hook-associated protein 2 | SAMN05444679_10153 | Not Available | Positive | 48868 - 50313 | 49344.7 |
| flagellar protein flis | SAMN05444679_10154 | Not Available | Positive | 50333 - 50755 | 14543.3 |
| flagellar protein flit | SAMN05444679_10155 | Not Available | Positive | 50780 - 51112 | 12483.2 |
| hook-length control protein flik | SAMN05444679_10156 | Not Available | Positive | 51129 - 52370 | 42230.0 |
| flagellar biosynthesis protein | SAMN05444679_10157 | Not Available | Positive | 52429 - 52722 | 10446.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
