Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_12848 | Not Available | Positive | 6049034 - 6049753 | 26214.6 |
| nicotinamidase-related amidase | SAMN05444679_12849 | Not Available | Positive | 6049908 - 6050561 | 23150.8 |
| xapx domain-containing protein | SAMN05444679_12850 | Not Available | Positive | 6050579 - 6050854 | 9643.17 |
| hypothetical protein | SAMN05444679_12851 | Not Available | Positive | 6050959 - 6052848 | 69112.4 |
| uncharacterized membrane protein ypha, doxx/surf4 family | SAMN05444679_12852 | Not Available | Positive | 6052848 - 6053249 | 14623.1 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_12853 | Not Available | Positive | 6053242 - 6054843 | 56609.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_12854 | Not Available | Positive | 6054881 - 6055702 | 29871.6 |
| hypothetical protein | SAMN05444679_12855 | Not Available | Positive | 6055722 - 6056084 | 12587.5 |
| hypothetical protein | SAMN05444679_12856 | Not Available | Positive | 6056115 - 6056429 | 11247.5 |
| hypothetical protein | SAMN05444679_12857 | Not Available | Negative | 6056634 - 6058490 | 67803.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
