Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter membrane protein 2, paat family | SAMN05444679_12828 | Not Available | Positive | 6030266 - 6030955 | 25065.3 |
| copper binding protein, plastocyanin/azurin family | SAMN05444679_12829 | Not Available | Positive | 6031094 - 6031609 | 18694.5 |
| hypothetical protein | SAMN05444679_12830 | Not Available | Negative | 6031624 - 6032331 | 25915.2 |
| phosphate abc transporter substrate-binding protein, phot family | SAMN05444679_12831 | Not Available | Negative | 6032623 - 6033462 | 29344.0 |
| hypothetical protein | SAMN05444679_12832 | Not Available | Positive | 6034963 - 6035448 | 17884.0 |
| catechol 2,3-dioxygenase | SAMN05444679_12833 | Not Available | Positive | 6035574 - 6036002 | 15592.2 |
| hypothetical protein | SAMN05444679_12834 | Not Available | Positive | 6036403 - 6036591 | 6986.21 |
| methyltransferase domain-containing protein | SAMN05444679_12835 | Not Available | Positive | 6036694 - 6037299 | 23236.7 |
| transposase dde domain-containing protein | SAMN05444679_12836 | Not Available | Positive | 6037347 - 6037547 | 7522.44 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN05444679_12837 | Not Available | Negative | 6037935 - 6038747 | 29253.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
