Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_12818 | Not Available | Positive | 6021462 - 6021698 | 8392.3 |
| transcriptional regulator, lysr family | SAMN05444679_12819 | Not Available | Negative | 6022030 - 6022944 | 32140.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12820 | Not Available | Positive | 6023254 - 6024228 | 34105.4 |
| hypothetical protein | SAMN05444679_12821 | Not Available | Positive | 6024299 - 6025279 | 36195.3 |
| thiolase, c-terminal domain | SAMN05444679_12822 | Not Available | Positive | 6025326 - 6025589 | 9509.69 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_12823 | Not Available | Negative | 6025818 - 6026756 | 34389.4 |
| hypothetical protein | SAMN05444679_12824 | Not Available | Positive | 6026854 - 6027306 | 16331.9 |
| cystathionine beta-lyase | SAMN05444679_12825 | Not Available | Positive | 6027412 - 6028566 | 41956.6 |
| l-glutamate-binding protein /l-aspartate-binding protein | SAMN05444679_12826 | Not Available | Positive | 6028589 - 6029491 | 33149.2 |
| l-glutamate abc transporter membrane protein /l-aspartate abc transporter membrane protein | SAMN05444679_12827 | Not Available | Positive | 6029529 - 6030266 | 27002.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
