Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized domain 1-containing protein | SAMN05444679_1288 | Not Available | Negative | 6012019 - 6012438 | 14630.9 |
| hypothetical protein | SAMN05444679_1289 | Not Available | Positive | 6012514 - 6012954 | 16064.0 |
| hypothetical protein | SAMN05444679_12810 | Not Available | Negative | 6013642 - 6013953 | 11638.0 |
| methyltransferase domain-containing protein | SAMN05444679_12811 | Not Available | Negative | 6014004 - 6014831 | 29832.6 |
| transcriptional regulator, arsr family | SAMN05444679_12812 | Not Available | Positive | 6014953 - 6015606 | 24297.6 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444679_12813 | Not Available | Positive | 6015637 - 6016389 | 26945.2 |
| sugar phosphate permease | SAMN05444679_12814 | Not Available | Positive | 6016402 - 6017682 | 45776.3 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_12815 | Not Available | Negative | 6017895 - 6018812 | 32709.1 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05444679_12816 | Not Available | Positive | 6018866 - 6020350 | 53661.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12817 | Not Available | Positive | 6020422 - 6021465 | 36513.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
