Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 6005971 - 6006044 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 6006085 - 6006159 | Not Available |
| elongation factor tu gtp binding domain-containing protein | SAMN05444679_12785 | Not Available | Positive | 6006236 - 6006325 | 3203.91 |
| smi1 / knr4 family (sukh-1) | SAMN05444679_1281 | Not Available | Positive | 6006552 - 6007646 | 39727.7 |
| uncharacterized conserved protein | SAMN05444679_1282 | Not Available | Positive | 6007931 - 6008236 | 10726.6 |
| hypothetical protein | SAMN05444679_1283 | Not Available | Negative | 6008431 - 6008787 | 12893.4 |
| hypothetical protein | SAMN05444679_1284 | Not Available | Negative | 6008853 - 6009122 | 10075.3 |
| n-acetylglutamate synthase, gnat family | SAMN05444679_1285 | Not Available | Positive | 6009912 - 6010448 | 19322.3 |
| dna-binding transcriptional regulator, marr family | SAMN05444679_1286 | Not Available | Positive | 6011066 - 6011566 | 18324.3 |
| hypothetical protein | SAMN05444679_1287 | Not Available | Negative | 6011563 - 6012015 | 16794.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
