Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chalcone isomerase-like | SAMN05444679_12773 | Not Available | Negative | 5998094 - 5998684 | 20944.8 |
| anthranilate synthase, component i | SAMN05444679_12774 | Not Available | Positive | 5998968 - 6000470 | 54887.1 |
| gxxexxy protein | SAMN05444679_12775 | Not Available | Positive | 6000470 - 6000859 | 13792.7 |
| anthranilate synthase component 2 | SAMN05444679_12776 | Not Available | Positive | 6000856 - 6001440 | 21199.5 |
| l-threonine aldolase | SAMN05444679_12777 | Not Available | Positive | 6001446 - 6002498 | 37445.9 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05444679_12778 | Not Available | Positive | 6002491 - 6003162 | 23470.1 |
| anthranilate phosphoribosyltransferase | SAMN05444679_12779 | Not Available | Positive | 6003185 - 6004210 | 35859.6 |
| indole-3-glycerol phosphate synthase | SAMN05444679_12780 | Not Available | Positive | 6004227 - 6005027 | 28700.7 |
| uracil-dna glycosylase | SAMN05444679_12781 | Not Available | Positive | 6005024 - 6005728 | 25229.4 |
| Trna-tyr | Not Available | Not Available | Positive | 6005831 - 6005916 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
