Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylpropionate dioxygenase, large terminal subunit | SAMN05444679_12763 | Not Available | Positive | 5987623 - 5988939 | 49486.6 |
| 3-phenylpropionate/cinnamic acid dioxygenase, small subunit | SAMN05444679_12764 | Not Available | Positive | 5988936 - 5989406 | 17540.9 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_12765 | Not Available | Positive | 5989445 - 5990602 | 40464.1 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444679_12766 | Not Available | Positive | 5990644 - 5991699 | 36228.7 |
| branched-chain amino acid transport system permease protein | SAMN05444679_12767 | Not Available | Positive | 5991696 - 5993567 | 66328.4 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444679_12768 | Not Available | Positive | 5993564 - 5994295 | 26077.6 |
| crotonobetaine/carnitine-coa ligase | SAMN05444679_12769 | Not Available | Positive | 5994282 - 5995889 | 57963.2 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444679_12770 | Not Available | Positive | 5995895 - 5996665 | 26391.5 |
| short-chain dehydrogenase | SAMN05444679_12771 | Not Available | Positive | 5996716 - 5997492 | 26467.6 |
| transcriptional regulator, marr family | SAMN05444679_12772 | Not Available | Positive | 5997489 - 5997995 | 19274.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
