Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vanillate o-demethylase ferredoxin subunit | SAMN05444679_12753 | Not Available | Positive | 5976804 - 5977787 | 35664.6 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN05444679_12754 | Not Available | Positive | 5977803 - 5979116 | 49437.6 |
| 3-phenylpropionate/cinnamic acid dioxygenase, small subunit | SAMN05444679_12755 | Not Available | Positive | 5979116 - 5979595 | 18664.0 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05444679_12756 | Not Available | Positive | 5979603 - 5981225 | 58195.3 |
| acetyl-coa acetyltransferase | SAMN05444679_12757 | Not Available | Positive | 5981222 - 5982391 | 41721.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_12758 | Not Available | Positive | 5982388 - 5983638 | 45489.8 |
| kynurenine formamidase | SAMN05444679_12759 | Not Available | Positive | 5983640 - 5984452 | 29682.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_12760 | Not Available | Positive | 5984449 - 5985180 | 25627.1 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_12761 | Not Available | Positive | 5985314 - 5986471 | 40575.9 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_12762 | Not Available | Positive | 5986473 - 5987615 | 39594.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
