Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_12743 | Not Available | Positive | 5966739 - 5967452 | 26147.8 |
| protein of unknown function | SAMN05444679_12744 | Not Available | Positive | 5967416 - 5967808 | 14704.6 |
| phosphoglycolate phosphatase | SAMN05444679_12745 | Not Available | Positive | 5967948 - 5968577 | 22472.9 |
| opine dehydrogenase | SAMN05444679_12746 | Not Available | Positive | 5968638 - 5969735 | 39667.5 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05444679_12747 | Not Available | Positive | 5969725 - 5970729 | 36070.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_12748 | Not Available | Positive | 5970726 - 5971529 | 29007.6 |
| nadph2:quinone reductase | SAMN05444679_12749 | Not Available | Positive | 5971526 - 5972383 | 29813.1 |
| dna-binding transcriptional regulator, marr family | SAMN05444679_12750 | Not Available | Negative | 5972475 - 5972993 | 19387.6 |
| indolepyruvate ferredoxin oxidoreductase alpha subunit | SAMN05444679_12751 | Not Available | Positive | 5973092 - 5975275 | 78282.8 |
| indolepyruvate ferredoxin oxidoreductase beta subunit | SAMN05444679_12752 | Not Available | Positive | 5975325 - 5976785 | 52763.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
