Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | SAMN05444679_10293 | Not Available | Positive | 569018 - 573043 | 150575.0 |
| two component transcriptional regulator, luxr family | SAMN05444679_10294 | Not Available | Positive | 573043 - 573669 | 22865.9 |
| response regulator receiver domain-containing protein | SAMN05444679_10295 | Not Available | Positive | 573777 - 574157 | 13426.1 |
| hypothetical protein | SAMN05444679_10296 | Not Available | Positive | 574195 - 574443 | 8819.2 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05444679_10297 | Not Available | Positive | 574461 - 575078 | 21875.7 |
| short chain enoyl-coa hydratase | SAMN05444679_10298 | Not Available | Positive | 575126 - 575782 | 22749.2 |
| aldo/keto reductase | SAMN05444679_10299 | Not Available | Positive | 575895 - 576752 | 30978.4 |
| ribosomal protein s18 acetylase rimi | SAMN05444679_102100 | Not Available | Positive | 576788 - 577243 | 17178.4 |
| phosphinothricin acetyltransferase | SAMN05444679_102101 | Not Available | Positive | 577249 - 577788 | 19726.7 |
| dna-binding transcriptional regulator, gntr family | SAMN05444679_102102 | Not Available | Negative | 577799 - 578542 | 26881.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
