Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fha domain protein | SAMN05444679_12733 | Not Available | Positive | 5956031 - 5957626 | 53999.5 |
| serine/threonine protein phosphatase prpc | SAMN05444679_12734 | Not Available | Positive | 5957649 - 5958425 | 27614.7 |
| type vi secretion system secreted protein hcp | SAMN05444679_12735 | Not Available | Negative | 5958471 - 5958953 | 17053.1 |
| type vi secretion system protein impc | SAMN05444679_12736 | Not Available | Negative | 5959080 - 5960576 | 55468.4 |
| type vi secretion system protein impb | SAMN05444679_12737 | Not Available | Negative | 5960610 - 5961125 | 18549.3 |
| type vi secretion system protein impa | SAMN05444679_12738 | Not Available | Negative | 5961165 - 5962196 | 36175.2 |
| type vi secretion system protein vasd | SAMN05444679_12739 | Not Available | Positive | 5962268 - 5962825 | 19850.3 |
| imcf-related n-terminal domain-containing protein | SAMN05444679_12740 | Not Available | Negative | 5962832 - 5963923 | 40252.9 |
| type iv / vi secretion system protein, dotu family | SAMN05444679_12741 | Not Available | Negative | 5963948 - 5965273 | 48138.5 |
| two component transcriptional regulator, luxr family | SAMN05444679_12742 | Not Available | Positive | 5965511 - 5966185 | 23860.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
