Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein impg | SAMN05444679_12723 | Not Available | Positive | 5940902 - 5942806 | 69652.0 |
| type vi secretion system protein imph | SAMN05444679_12724 | Not Available | Positive | 5942770 - 5943861 | 41005.0 |
| type vi secretion system protein vasg | SAMN05444679_12725 | Not Available | Positive | 5943905 - 5946577 | 97601.0 |
| hypothetical protein | SAMN05444679_12726 | Not Available | Positive | 5946604 - 5947425 | 29720.6 |
| predicted methyltransferase, contains tpr repeat | SAMN05444679_12727 | Not Available | Positive | 5947454 - 5948821 | 49393.5 |
| type vi secretion system secreted protein vgrg | SAMN05444679_12728 | Not Available | Positive | 5948842 - 5951214 | 87158.0 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN05444679_12729 | Not Available | Positive | 5951233 - 5953884 | 95256.6 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN05444679_12730 | Not Available | Positive | 5953881 - 5954957 | 38398.2 |
| protein of unknown function | SAMN05444679_12731 | Not Available | Positive | 5954963 - 5955601 | 22980.6 |
| protein of unknown function | SAMN05444679_12732 | Not Available | Positive | 5955612 - 5956007 | 13101.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
