Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_1273 | Not Available | Positive | 5917882 - 5918202 | 11604.6 |
| hypothetical protein | SAMN05444679_1274 | Not Available | Positive | 5918214 - 5918945 | 27075.3 |
| hypothetical protein | SAMN05444679_1275 | Not Available | Negative | 5918968 - 5919342 | 13485.8 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05444679_1276 | Not Available | Positive | 5919414 - 5920049 | 21727.3 |
| protein of unknown function | SAMN05444679_1277 | Not Available | Negative | 5920067 - 5920342 | 10206.1 |
| uncharacterized conserved protein ykwd, contains cap (csp/antigen 5/pr1) domain | SAMN05444679_1278 | Not Available | Positive | 5920520 - 5921605 | 36621.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_1279 | Not Available | Positive | 5921674 - 5922693 | 35474.2 |
| caspase domain-containing protein | SAMN05444679_12710 | Not Available | Negative | 5922704 - 5924140 | 52348.5 |
| type vi secretion system protein impj | SAMN05444679_12711 | Not Available | Positive | 5924408 - 5925703 | 47787.6 |
| type vi secretion system protein impk | SAMN05444679_12712 | Not Available | Positive | 5925737 - 5927065 | 47529.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
