Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmuconolactone methyl-isomerase | SAMN05444679_12691 | Not Available | Negative | 5910186 - 5910827 | 23848.4 |
| conserved hypothetical protein | SAMN05444679_12692 | Not Available | Negative | 5910844 - 5911539 | 26460.3 |
| 2,4-dienoyl-coa reductase | SAMN05444679_12693 | Not Available | Negative | 5911545 - 5912729 | 42301.3 |
| eama domain-containing membrane protein rard | SAMN05444679_12694 | Not Available | Negative | 5912742 - 5913665 | 32241.7 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_12695 | Not Available | Negative | 5913669 - 5914763 | 37904.0 |
| acetate coa/acetoacetate coa-transferase beta subunit | SAMN05444679_12696 | Not Available | Negative | 5914883 - 5915524 | 22398.5 |
| acetate coa/acetoacetate coa-transferase alpha subunit | SAMN05444679_12697 | Not Available | Negative | 5915521 - 5916180 | 22938.3 |
| fumarylacetoacetase | SAMN05444679_12698 | Not Available | Negative | 5916177 - 5916766 | 21226.8 |
| haemagluttinin repeat-containing protein | SAMN05444679_1271 | Not Available | Positive | 5916767 - 5916973 | 7335.55 |
| hypothetical protein | SAMN05444679_1272 | Not Available | Positive | 5917217 - 5917915 | 25455.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
