Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_12681 | Not Available | Positive | 5901885 - 5902007 | 4525.57 |
| hypothetical protein | SAMN05444679_12682 | Not Available | Positive | 5902139 - 5903641 | 56448.1 |
| nudix domain-containing protein | SAMN05444679_12683 | Not Available | Positive | 5903852 - 5904298 | 16357.8 |
| hypothetical protein | SAMN05444679_12684 | Not Available | Positive | 5904453 - 5904890 | 16183.5 |
| lactate dehydrogenase | SAMN05444679_12685 | Not Available | Negative | 5905053 - 5906012 | 33781.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12686 | Not Available | Negative | 5906018 - 5906977 | 33259.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12687 | Not Available | Negative | 5906988 - 5907959 | 33247.9 |
| transcriptional regulator, lysr family | SAMN05444679_12688 | Not Available | Positive | 5908055 - 5908963 | 33665.2 |
| hypothetical protein | SAMN05444679_12689 | Not Available | Negative | 5909484 - 5909774 | 11064.2 |
| hypothetical protein | SAMN05444679_12690 | Not Available | Negative | 5909845 - 5910021 | 6465.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
