Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein hu-beta | SAMN05444679_12651 | Not Available | Negative | 5870812 - 5871093 | 9646.51 |
| enoyl-coa hydratase/carnithine racemase | SAMN05444679_12652 | Not Available | Negative | 5871993 - 5872727 | 26816.2 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444679_12653 | Not Available | Negative | 5872724 - 5873947 | 43507.3 |
| choline-sulfatase | SAMN05444679_12654 | Not Available | Positive | 5874030 - 5875553 | 57426.0 |
| sulfoacetaldehyde dehydrogenase | SAMN05444679_12655 | Not Available | Positive | 5875567 - 5877066 | 52939.9 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05444679_12656 | Not Available | Positive | 5877091 - 5877984 | 30084.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12657 | Not Available | Positive | 5878008 - 5878973 | 33919.2 |
| hypothetical protein | SAMN05444679_12658 | Not Available | Positive | 5878978 - 5879715 | 25919.0 |
| transcriptional regulator, gntr family | SAMN05444679_12659 | Not Available | Positive | 5879746 - 5880432 | 25332.7 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05444679_12660 | Not Available | Negative | 5880463 - 5881260 | 29177.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
