Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05444679_10283 | Not Available | Negative | 561406 - 562338 | 33120.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_10284 | Not Available | Positive | 562460 - 563434 | 33861.2 |
| uncharacterized conserved protein glcg, duf336 family | SAMN05444679_10285 | Not Available | Positive | 563467 - 563991 | 18682.3 |
| 2-keto-4-pentenoate hydratase | SAMN05444679_10286 | Not Available | Positive | 564077 - 564892 | 28532.6 |
| 2-oxo-3-hexenedioate decarboxylase | SAMN05444679_10287 | Not Available | Positive | 564889 - 565656 | 27167.6 |
| 4-oxalocrotonate tautomerase | SAMN05444679_10288 | Not Available | Positive | 565660 - 565914 | 9105.05 |
| acetaldehyde dehydrogenase | SAMN05444679_10289 | Not Available | Positive | 565925 - 566884 | 33653.0 |
| 4-hydroxy 2-oxovalerate aldolase | SAMN05444679_10290 | Not Available | Positive | 566881 - 567933 | 37639.8 |
| hypothetical protein | SAMN05444679_10291 | Not Available | Positive | 568055 - 568330 | 9397.74 |
| hypothetical protein | SAMN05444679_10292 | Not Available | Positive | 568440 - 568823 | 13867.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
