Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-protein synthetase, luxe | SAMN05444679_12631 | Not Available | Positive | 5850482 - 5851600 | 40763.3 |
| acyl-coa reductase (luxc) | SAMN05444679_12632 | Not Available | Positive | 5851597 - 5853066 | 52749.4 |
| nitt/taut family transport system atp-binding protein | SAMN05444679_12633 | Not Available | Positive | 5853075 - 5853821 | 27326.3 |
| nitt/taut family transport system permease protein | SAMN05444679_12634 | Not Available | Positive | 5853818 - 5854585 | 27311.9 |
| nitt/taut family transport system substrate-binding protein | SAMN05444679_12635 | Not Available | Positive | 5854597 - 5855598 | 35363.7 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444679_12636 | Not Available | Positive | 5855595 - 5856377 | 27601.9 |
| hypothetical protein | SAMN05444679_12637 | Not Available | Negative | 5856700 - 5857317 | 22851.3 |
| threonine 3-dehydrogenase | SAMN05444679_12638 | Not Available | Negative | 5857310 - 5858344 | 36651.5 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12639 | Not Available | Negative | 5858362 - 5859321 | 33331.5 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_12640 | Not Available | Positive | 5859444 - 5860361 | 33000.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
