Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate decarboxylase | SAMN05444679_125134 | Not Available | Positive | 5822329 - 5822451 | 4622.46 |
| cupin domain-containing protein | SAMN05444679_1261 | Not Available | Negative | 5822534 - 5823049 | 18533.4 |
| hypothetical protein | SAMN05444679_1262 | Not Available | Negative | 5823470 - 5826043 | 89794.7 |
| protein of unknown function | SAMN05444679_1263 | Not Available | Positive | 5827282 - 5827998 | 26110.9 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN05444679_1264 | Not Available | Positive | 5828017 - 5828898 | 33749.9 |
| hypothetical protein | SAMN05444679_1265 | Not Available | Negative | 5829238 - 5829525 | 10638.6 |
| hypothetical protein | SAMN05444679_1266 | Not Available | Negative | 5830047 - 5830268 | 8064.39 |
| eama domain-containing membrane protein rard | SAMN05444679_1267 | Not Available | Positive | 5830628 - 5831518 | 31245.3 |
| antirestriction protein ardc | SAMN05444679_1268 | Not Available | Negative | 5831657 - 5832589 | 33957.4 |
| dna repair protein radc | SAMN05444679_1269 | Not Available | Negative | 5833177 - 5833770 | 21238.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
