Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inhibitor of kina | SAMN05444679_125114 | Not Available | Negative | 5803178 - 5803861 | 24789.7 |
| aspartate aminotransferase | SAMN05444679_125115 | Not Available | Negative | 5803947 - 5805134 | 42327.8 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05444679_125116 | Not Available | Positive | 5805541 - 5806590 | 38021.8 |
| putative spermidine/putrescine transport system permease protein | SAMN05444679_125117 | Not Available | Positive | 5806601 - 5808307 | 60292.5 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN05444679_125118 | Not Available | Positive | 5808309 - 5809355 | 37948.8 |
| dna-binding transcriptional regulator, gntr family | SAMN05444679_125119 | Not Available | Positive | 5809411 - 5810157 | 27012.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05444679_125120 | Not Available | Positive | 5810216 - 5811196 | 35218.6 |
| n-acyl-d-amino-acid deacylase | SAMN05444679_125121 | Not Available | Positive | 5811211 - 5812677 | 52235.6 |
| hypothetical protein | SAMN05444679_125122 | Not Available | Positive | 5813024 - 5813986 | 36090.1 |
| mapeg family protein | SAMN05444679_125123 | Not Available | Positive | 5814031 - 5814447 | 15530.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
