Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetoin utilization deacetylase acuc | SAMN05444679_125104 | Not Available | Positive | 5793212 - 5794156 | 33827.2 |
| acetyltransferase | SAMN05444679_125105 | Not Available | Positive | 5794161 - 5796851 | 96009.7 |
| hypothetical protein | SAMN05444679_125106 | Not Available | Negative | 5797001 - 5797288 | 10457.4 |
| hypothetical protein | SAMN05444679_125107 | Not Available | Negative | 5797486 - 5797842 | 13118.3 |
| hypothetical protein | SAMN05444679_125108 | Not Available | Positive | 5798091 - 5798264 | 6110.57 |
| hypothetical protein | SAMN05444679_125109 | Not Available | Negative | 5798712 - 5799125 | 15419.5 |
| glyoxylate/hydroxypyruvate reductase a | SAMN05444679_125110 | Not Available | Negative | 5799186 - 5800181 | 35658.8 |
| l-threonine ammonia-lyase | SAMN05444679_125111 | Not Available | Negative | 5800231 - 5801238 | 35080.5 |
| upf0271 protein | SAMN05444679_125112 | Not Available | Negative | 5801372 - 5802124 | 26558.9 |
| biotin-dependent carboxylase uncharacterized domain-containing protein | SAMN05444679_125113 | Not Available | Negative | 5802168 - 5803181 | 36269.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
