Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketopantoate reductase | SAMN05444679_12594 | Not Available | Positive | 5782922 - 5783848 | 33417.4 |
| uncharacterized conserved protein, duf1330 family | SAMN05444679_12595 | Not Available | Negative | 5784047 - 5784340 | 11032.1 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05444679_12596 | Not Available | Negative | 5784646 - 5785650 | 36664.4 |
| gst-like protein | SAMN05444679_12597 | Not Available | Positive | 5785769 - 5786377 | 22093.7 |
| glutathione s-transferase | SAMN05444679_12598 | Not Available | Negative | 5786932 - 5787585 | 23724.6 |
| hypothetical protein | SAMN05444679_12599 | Not Available | Negative | 5787717 - 5788259 | 20036.6 |
| transcriptional regulator, hxlr family | SAMN05444679_125100 | Not Available | Negative | 5788646 - 5789344 | 26407.8 |
| fad/fmn-containing dehydrogenase | SAMN05444679_125101 | Not Available | Positive | 5789448 - 5790875 | 51609.1 |
| adenylate and guanylate cyclase catalytic domain-containing protein | SAMN05444679_125102 | Not Available | Negative | 5791308 - 5791934 | 22130.6 |
| phytochelatin synthase | SAMN05444679_125103 | Not Available | Positive | 5792065 - 5792892 | 29196.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
