Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kynurenine formamidase | SAMN05444679_12584 | Not Available | Positive | 5775225 - 5775905 | 25353.1 |
| hypothetical protein | SAMN05444679_12585 | Not Available | Positive | 5775902 - 5776096 | 6901.07 |
| uncharacterized conserved protein yece, duf72 family | SAMN05444679_12586 | Not Available | Positive | 5776062 - 5776832 | 29090.4 |
| hypothetical protein | SAMN05444679_12587 | Not Available | Positive | 5776829 - 5776954 | 4759.89 |
| hypothetical protein | SAMN05444679_12588 | Not Available | Negative | 5777175 - 5777819 | 24184.8 |
| aliphatic nitrilase | SAMN05444679_12589 | Not Available | Negative | 5777832 - 5778863 | 37155.2 |
| hypothetical protein | SAMN05444679_12590 | Not Available | Negative | 5778996 - 5779568 | 21628.0 |
| winged helix-turn helix | SAMN05444679_12591 | Not Available | Negative | 5779603 - 5779779 | 6745.14 |
| hypothetical protein | SAMN05444679_12592 | Not Available | Negative | 5779982 - 5780257 | 9901.81 |
| l-alanine-dl-glutamate epimerase | SAMN05444679_12593 | Not Available | Positive | 5781364 - 5782476 | 39555.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
