Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, xre family | SAMN05444679_12574 | Not Available | Positive | 5765726 - 5766223 | 17946.0 |
| nucleotidyl transferase abieii toxin, type iv ta system | SAMN05444679_12575 | Not Available | Positive | 5766220 - 5766885 | 24850.5 |
| hypothetical protein | SAMN05444679_12576 | Not Available | Positive | 5767379 - 5767585 | 7628.53 |
| isoleucyl-trna synthetase | SAMN05444679_12577 | Not Available | Negative | 5767651 - 5770194 | 94196.4 |
| phasin family protein | SAMN05444679_12578 | Not Available | Negative | 5770833 - 5771243 | 15109.5 |
| protein of unknown function | SAMN05444679_12579 | Not Available | Negative | 5771386 - 5771817 | 16333.0 |
| hypothetical protein | SAMN05444679_12580 | Not Available | Negative | 5772051 - 5772623 | 21593.0 |
| tannase and feruloyl esterase | SAMN05444679_12581 | Not Available | Negative | 5772944 - 5773183 | 8620.26 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_12582 | Not Available | Positive | 5773541 - 5774257 | 25585.3 |
| hypothetical protein | SAMN05444679_12583 | Not Available | Negative | 5774354 - 5774527 | 6370.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
