Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enolase | SAMN05444679_10273 | Not Available | Positive | 550854 - 552161 | 45877.4 |
| chromate reductase | SAMN05444679_10274 | Not Available | Positive | 552177 - 552764 | 20483.8 |
| catechol 2,3-dioxygenase | SAMN05444679_10275 | Not Available | Positive | 552808 - 553812 | 37612.7 |
| alkylhydroperoxidase family enzyme, contains cxxc motif | SAMN05444679_10276 | Not Available | Positive | 553833 - 554363 | 19686.4 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_10277 | Not Available | Positive | 554425 - 555645 | 43187.9 |
| alcohol dehydrogenase | SAMN05444679_10278 | Not Available | Positive | 555668 - 556795 | 40218.6 |
| phosphotransferase enzyme family protein | SAMN05444679_10279 | Not Available | Positive | 556792 - 557796 | 36629.0 |
| d-3-phosphoglycerate dehydrogenase | SAMN05444679_10280 | Not Available | Negative | 557826 - 558791 | 33986.8 |
| transcriptional regulator, laci family | SAMN05444679_10281 | Not Available | Negative | 558820 - 559866 | 37494.2 |
| outer membrane protein (porin) | SAMN05444679_10282 | Not Available | Positive | 560120 - 561409 | 44734.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
