Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12554 | Not Available | Positive | 5746194 - 5747180 | 34256.0 |
| regulator of rnase e activity rraa | SAMN05444679_12555 | Not Available | Positive | 5747219 - 5747908 | 23829.2 |
| d-3-phosphoglycerate dehydrogenase | SAMN05444679_12556 | Not Available | Positive | 5747905 - 5748831 | 31877.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12557 | Not Available | Positive | 5748842 - 5749843 | 34931.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12558 | Not Available | Positive | 5749894 - 5750850 | 33522.8 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN05444679_12559 | Not Available | Positive | 5750951 - 5751745 | 29121.8 |
| gluconolactonase | SAMN05444679_12560 | Not Available | Positive | 5751809 - 5752744 | 33843.1 |
| hypothetical protein | SAMN05444679_12561 | Not Available | Positive | 5753296 - 5753388 | 3165.87 |
| lysr family transcriptional regulator, malonate utilization transcriptional regulator | SAMN05444679_12562 | Not Available | Positive | 5753457 - 5754371 | 33473.9 |
| transporter, uit1 family | SAMN05444679_12563 | Not Available | Positive | 5754534 - 5755907 | 47171.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
