Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_12544 | Not Available | Positive | 5739597 - 5739974 | 14136.6 |
| hypothetical protein | SAMN05444679_12545 | Not Available | Positive | 5739995 - 5741152 | 43242.9 |
| hypothetical protein | SAMN05444679_12546 | Not Available | Positive | 5741160 - 5741345 | 6431.74 |
| antitoxin vapb | SAMN05444679_12547 | Not Available | Positive | 5741472 - 5741702 | 8526.01 |
| trna(fmet)-specific endonuclease vapc | SAMN05444679_12548 | Not Available | Positive | 5741703 - 5742107 | 14935.9 |
| predicted transcriptional regulator | SAMN05444679_12549 | Not Available | Positive | 5742275 - 5742517 | 8881.32 |
| plasmid stabilization system protein pare | SAMN05444679_12550 | Not Available | Positive | 5742507 - 5742791 | 10718.0 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_12551 | Not Available | Positive | 5743210 - 5744121 | 33518.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12552 | Not Available | Positive | 5744251 - 5745261 | 34569.6 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN05444679_12553 | Not Available | Positive | 5745288 - 5746175 | 31909.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
