Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| von willebrand factor type a domain-containing protein | SAMN05444679_12514 | Not Available | Positive | 5717371 - 5719356 | 72502.0 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_12515 | Not Available | Positive | 5719398 - 5720549 | 42684.7 |
| two-component response regulator, amir/nast family, consists of rec and rna-binding antiterminator (antar) domains | SAMN05444679_12516 | Not Available | Positive | 5720551 - 5721180 | 23343.6 |
| hypothetical protein | SAMN05444679_12517 | Not Available | Negative | 5721420 - 5721575 | 5764.04 |
| hypothetical protein | SAMN05444679_12518 | Not Available | Positive | 5721908 - 5722348 | 15234.9 |
| two-component system, ompr family, heavy metal sensor histidine kinase cuss | SAMN05444679_12519 | Not Available | Negative | 5722400 - 5723719 | 48166.4 |
| two-component system, ompr family, copper resistance phosphate regulon response regulator cusr | SAMN05444679_12520 | Not Available | Negative | 5723716 - 5724399 | 25456.9 |
| hypothetical protein | SAMN05444679_12521 | Not Available | Positive | 5724564 - 5724953 | 13147.4 |
| uncharacterized copper-binding protein, cupredoxin-like subfamily | SAMN05444679_12522 | Not Available | Positive | 5725158 - 5725655 | 17612.2 |
| cu and ag efflux protein cusf | SAMN05444679_12523 | Not Available | Positive | 5725734 - 5726084 | 12539.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
