Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa:oxalate coa-transferase | SAMN05444679_1254 | Not Available | Negative | 5706573 - 5707832 | 45196.3 |
| choline dehydrogenase | SAMN05444679_1255 | Not Available | Negative | 5707854 - 5709518 | 60496.7 |
| transcriptional regulator, tetr family | SAMN05444679_1256 | Not Available | Negative | 5709606 - 5710241 | 23698.3 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_1257 | Not Available | Positive | 5710711 - 5711904 | 42765.3 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444679_1258 | Not Available | Positive | 5711944 - 5712846 | 32393.4 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444679_1259 | Not Available | Positive | 5712850 - 5713896 | 37220.0 |
| urea transport system atp-binding protein | SAMN05444679_12510 | Not Available | Positive | 5713893 - 5714696 | 29323.5 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444679_12511 | Not Available | Positive | 5714707 - 5715396 | 25285.0 |
| amidase | SAMN05444679_12512 | Not Available | Positive | 5715447 - 5716484 | 38284.8 |
| nitric oxide reductase norq protein | SAMN05444679_12513 | Not Available | Positive | 5716549 - 5717355 | 29809.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
