Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444679_124111 | Not Available | Positive | 5689711 - 5690460 | 28648.8 |
| rna polymerase-binding transcription factor dksa | SAMN05444679_124112 | Not Available | Positive | 5690641 - 5690997 | 13292.1 |
| ubiquinone biosynthesis hydroxylase, ubih/ubif/visc/coq6 family | SAMN05444679_124113 | Not Available | Positive | 5691166 - 5692386 | 43211.1 |
| hemerythrin-like metal-binding domain protein | SAMN05444679_124114 | Not Available | Negative | 5692390 - 5692866 | 17615.1 |
| uncharacterised 5xtm membrane bcr, yitt family cog1284 | SAMN05444679_124115 | Not Available | Negative | 5692897 - 5693781 | 31122.1 |
| hemerythrin-like domain-containing protein | SAMN05444679_124116 | Not Available | Negative | 5693962 - 5694504 | 20333.2 |
| cu+-exporting atpase | SAMN05444679_124117 | Not Available | Negative | 5694684 - 5696825 | 74563.5 |
| hypothetical protein | SAMN05444679_124118 | Not Available | Negative | 5697014 - 5697310 | 10264.9 |
| protein-s-isoprenylcysteine o-methyltransferase ste14 | SAMN05444679_124119 | Not Available | Negative | 5697303 - 5697956 | 24858.3 |
| protein of unknown function | SAMN05444679_124120 | Not Available | Negative | 5697937 - 5698188 | 9444.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
