Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polar amino acid transport system substrate-binding protein | SAMN05444679_10263 | Not Available | Negative | 541078 - 541815 | 25941.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_10264 | Not Available | Positive | 541930 - 542889 | 35157.8 |
| acetoacetate decarboxylase | SAMN05444679_10265 | Not Available | Negative | 542877 - 543626 | 27443.2 |
| patatin phospholipase | SAMN05444679_10266 | Not Available | Negative | 543654 - 544190 | 20258.3 |
| hypothetical protein | SAMN05444679_10267 | Not Available | Positive | 544771 - 545826 | 36629.3 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444679_10268 | Not Available | Negative | 545902 - 546696 | 28254.9 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444679_10269 | Not Available | Positive | 546961 - 547809 | 29437.8 |
| amino acid/amide abc transporter membrane protein 2, haat family /amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444679_10270 | Not Available | Positive | 547800 - 549563 | 61342.8 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444679_10271 | Not Available | Positive | 549553 - 550260 | 25530.3 |
| hypothetical protein | SAMN05444679_10272 | Not Available | Positive | 550250 - 550861 | 21482.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
