Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | SAMN05444679_12471 | Not Available | Positive | 5646292 - 5648754 | 90001.9 |
| hypothetical protein | SAMN05444679_12472 | Not Available | Positive | 5648962 - 5649111 | 5620.93 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN05444679_12473 | Not Available | Negative | 5649105 - 5649833 | 26792.5 |
| aspartate/ornithine carbamoyltransferase, carbamoyl-p binding domain | SAMN05444679_12474 | Not Available | Positive | 5649968 - 5650846 | 30850.8 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444679_12475 | Not Available | Positive | 5650880 - 5651380 | 18324.0 |
| pyridoxamine 5'-phosphate oxidase | SAMN05444679_12476 | Not Available | Negative | 5652260 - 5652733 | 17925.8 |
| hypothetical protein | SAMN05444679_12477 | Not Available | Negative | 5652780 - 5653157 | 14042.8 |
| hypothetical protein | SAMN05444679_12478 | Not Available | Positive | 5653425 - 5653697 | 10031.0 |
| hemoglobin | SAMN05444679_12479 | Not Available | Positive | 5653684 - 5654127 | 16593.6 |
| hemerythrin hhe cation binding domain-containing protein | SAMN05444679_12480 | Not Available | Positive | 5654124 - 5654768 | 24221.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
